Enhancing PCR Amplification of DNA From Recalcitrant Plant Specimens Using a Trelahose-Based Additive

Authors

Tharangamala Samarakoon, University of Southern MississippiFollow
Shiao Y. Wang, University of Southern MississippiFollow
Mac H. Alford, University of Southern MississippiFollow

Document Type

Article

Publication Date

1-1-2013

Department

Biological Sciences

School

Biological, Environmental, and Earth Sciences

Abstract

Premise of the study: PCR amplification of DNA extracted from plants is sometimes difficult due to the presence of inhibitory compounds. An effective method to overcome the inhibitory effect of compounds that contaminate DNA from difficult plant specimens is needed.

Methods and Results: The effectiveness of a PCR additive reagent containing trehalose, bovine serum albumin (BSA), and polysorbate‐20 (Tween‐20) (TBT‐PAR) was tested. PCR of DNA extracted from fresh, silica‐dried, and herbarium leaf material of species of Achariaceae, Asteraceae, Lacistemataceae, and Samydaceae that failed using standard techniques were successful with the addition of TBT‐PAR.

Conclusions: The addition of TBT‐PAR during routine PCR is an effective method to improve amplification of DNA extracted from herbarium specimens or plants that are known to contain PCR inhibitors.

Comments

Published by Applications in Plant Sciences at 10.3732/apps.1200236.

Publication Title

Applications in Plant Sciences

Volume

1

Issue

1

First Page

1

Last Page

3

Recommended Citation

Samarakoon, T., Wang, S. Y., Alford, M. H. (2013). Enhancing PCR Amplification of DNA From Recalcitrant Plant Specimens Using a Trelahose-Based Additive. Applications in Plant Sciences, 1(1), 1-3.
Available at: https://aquila.usm.edu/fac_pubs/15092